Table 4.
The information of three significant SNP markers associated with four mineral compounds among the 292 spinach accessions using six statistical models, SMR_Qgene, SMR_tassel, GLM_tassel, MLM_tassel, CMLM_gapit, and EcMLM_gapit. Co, Mn, S, and Zn based on T-tesing at P = 0.05
| Trait | LOD value (−LOG(p)) | R-squre (%) | MAF | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Qgene | Tassel | GAPIT | Qgene | Tassel | ||||||||
| Marker | SMR | SMR | GLM | MLM | cMLM | EcMLM | SMR | SMR | GLM | MLM | ||
| Co | AYZV02017730_40 | 3.74 | 3.83 | 2.35 | 1.98 | 2.26 | 1.55 | 7.00 | 6.12 | 3.16 | 2.78 | 7.17 |
| Mn | AYZV02017730_40 | 2.06 | 2.65 | 2.10 | 1.15 | 0.99 | 0.66 | 3.20 | 3.28 | 2.46 | 1.17 | 6.53 |
| S | AYZV02017730_40 | 3.25 | 3.95 | 3.09 | 2.42 | 2.22 | 1.47 | 5.00 | 5.17 | 3.83 | 3.01 | 6.53 |
| Zn | AYZV02017730_40 | 3.35 | 3.93 | 2.63 | 2.04 | 1.80 | 1.19 | 5.10 | 5.15 | 2.98 | 2.51 | 6.53 |
| Co | AYZV02094133_57 | 2.07 | 2.53 | 1.46 | 1.27 | 1.08 | 0.65 | 3.90 | 4.18 | 1.93 | 1.78 | 16.67 |
| Mn | AYZV02094133_57 | 4.04 | 4.50 | 3.49 | 2.16 | 0.33 | 0.63 | 6.20 | 6.56 | 4.88 | 2.98 | 16.32 |
| S | AYZV02094133_57 | 5.36 | 6.48 | 6.15 | 4.96 | 3.06 | 2.46 | 8.10 | 9.70 | 8.95 | 7.87 | 16.32 |
| Zn | AYZV02094133_57 | 1.62 | 2.30 | 1.99 | 1.13 | 0.49 | 0.17 | 2.50 | 3.04 | 2.35 | 1.28 | 16.32 |
| Co | AYZV02281036_185 | 2.29 | 1.54 | 1.12 | 1.06 | 2.37 | 1.41 | 4.30 | 3.17 | 2.12 | 2.23 | 9.07 |
| Mn | AYZV02281036_185 | 3.12 | 3.45 | 3.01 | 2.88 | 2.97 | 1.95 | 4.80 | 5.69 | 4.95 | 5.14 | 8.59 |
| S | AYZV02281036_185 | 2.35 | 2.00 | 1.70 | 1.75 | 1.71 | 1.35 | 3.60 | 3.34 | 2.78 | 3.03 | 8.59 |
| Zn | AYZV02281036_185 | 2.86 | 2.85 | 2.60 | 2.47 | 3.19 | 2.76 | 4.40 | 4.73 | 3.97 | 4.22 | 8.59 |