Skip to main content
. 2017 Dec 4;12:72. doi: 10.1186/s40793-017-0285-8

Table 7.

Genome statistics of MB2003, JK615T and B316T

Attribute B. hungatei MB2003 B. hungatei JK615Tb B. proteoclasticus B316T
Value % of totala Value % of totala Value % of totala
Status Complete Draft Complete
Isolation source Bovine rumen Ovine rumen Bovine rumen
Genome size (bp) 3,386,314 100 3,394,947 100 4,404,886 100
DNA coding (bp) 3,064,986 90.51 3,108,180 91.55 3,954,077 89.77
DNA G + C (bp) 1,344,683 39.71 1,353,252 39.86 1,762,323 40.01
Number of replicons 4 NA 4
DNA scaffolds 4 100 22 100 4 100
Total genes 3064 100 3104 100 3863 100
Protein coding genes 2983 97.36 2996 96.52 3739 96.79
RNA genes 60 1.96 55 1.78 68 1.75
rRNA operons 4 4 6
tRNA genes 48 1.57 46 1.49 50 1.29
Pseudo genes 17 0.56 49 54 1.39
Genes in internal clusters 160 5.22 211 6.82 327 8.43
Genes with function prediction 2225 72.62 2314 74.55 2505 64.85
Genes assigned to COGs 1842 61.34 1861 60.17 2075 53.49
Genes with Pfam domains 2350 78.26 2407 77.82 2784 71.77
Genes with signal peptides 148 4.93 137 4.43 269 6.93
Genes with transmembrane helices 881 29.34 847 27.38 1061 27.35
CRISPR repeats 2 NA NA
Reference This report [32] [29]

aThe total is based on either the size of the genome in base pairs or the total number of genes or protein-coding genes in the annotated genome. bIndicates draft genome sequence