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. 2017 Dec 4;48:85. doi: 10.1186/s13567-017-0493-7

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© The Author(s) 2017

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Proteins adsorbed to the pellets obtained from caecal contents of germ-free, E. coli and E. faecium associated chickens. Six proteins were found as differently abundant either in E. coli or E. faecium associated chickens (*p < 0.05). Igλ, PIGR, pancreatic lipase PINLIP and CPA2 carboxypeptidase A2 were more abundant in the pellets obtained from caecal contents of E. coli associated chickens. Cystathionine β-synthase CBS and ANPEP carboxypeptidase N were more abundant in the pellets obtained from the chickens associated with E. faecium.