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. Author manuscript; available in PMC: 2018 Dec 1.
Published in final edited form as: J Biomed Inform. 2017 Nov 4;76:59–68. doi: 10.1016/j.jbi.2017.11.003

Table 2. Significantly enriched SNPs causing missense mutations.

BETA: fitted coefficient; SE: standard error for BETA; P: p-value.

Position Gene ID Strand Gene Symbol SNP BETA SE P Comparison
chr22:42781198 150372 NFAM1 rs151280792:42781198:C:G 0.0321 0.0062 1.97E-07 O vs N
chr9:127213445 347088 + ADGRD2 rs76928670:127213445:G:A 0.0358 0.0070 3.72E -07 O vs N
chr9:34655629 3590 + IL11RA rs76429508:34655629:C:T 0.0402 0.0079 4.20E-07 O vs N
chr16:88600792 161882 + ZFPM1 rs75878389:88600792:C:T 0.0197 0.0041 1.74E-06 O vs N
chr10:115535561 79949 + PLEKHS1 rs34024791:115535561:G:A 0.0220 0.0047 2.22E-06 O vs N
chr1:52231560 114883 + OSBPL9 rs61739207:52231560:C:T 0.0523 0.0100 1.59E-07 Y vs N
chr1:247614606 127623 OR2B11 rs74583618:247614606:G:A 0.0403 0.0082 9.26E-07 Y vs N