Table 1.

Description of Chlamydia gallinacea JX-1 genome

Strain	Chlamydia gallinacea JX-1
Clinical manifestation and anatomical site sample type	Asymptomatic/Cloacal swab
Host and country of origin	Chicken, China
Total No. of filtered reads	66,564
Average read length	11,688 bp
Average read depth	100 ×
Genome size (bp) and % GC	1,059,522 bp / 37.93% GC
No. of predicted CDSs	957
Chlamydial plasmid and size	Present: pJX-1 (7.49 Kbp)
nc RNAs	39 tRNAs, two 5S rRNA, and single copy of 16S rRNA and 23S rRNA
Pyrimidine genes	Present (pyrG, pyrE, pyrH, ndk)
Biotin operon	Present (bioADFB, bioY)
Tryptophan operon	Absent
% DNA sequence identity C. gallinacea 08-1274/3	99.4%
Accession number	CP019792