Skip to main content
. Author manuscript; available in PMC: 2017 Dec 13.
Published in final edited form as: J Chem Theory Comput. 2016 Nov 10;12(12):6130–6146. doi: 10.1021/acs.jctc.6b00757

Figure 7.

Figure 7

HDBSCAN clustering output suggests that the unbound thrombin aptamer is generally unstable but has some long-lived states. On this system, Amorim–Hennig binned the system into what appear to be compactness-based bins (Supporting Information, Figure S4). Thrombin aptamer DNA strand is colored by residue number drawn with VMD’s NewCartoon method. Visualized clusters are from HDBSCAN.