TABLE II. Comparison of the genomes of G10P[14] rotavirus strains deposited in GenBank.
Rotavirus strain | VP7 | VP4 | VP6 | VP1 | VP2 | VP3 | NSP1 | NSP2 | NSP3 | NSP4 | NSP5 | Reference |
---|---|---|---|---|---|---|---|---|---|---|---|---|
RVA/Human-wt/HON/5363/2011/G10P[14] | G10 | P[14] | I2 | R2 | C2 | M2 | A3 | N2 | T6 | E2 | H3 | Strain in this paper |
RVA/Human-wt/AUS/V585/2011/G10P[14] | G10 | P[14] | I2 | R2 | C2 | M2 | A11 | N2 | T6 | E2 | H3 | Cowley etal. (2013) |
RVA/Human-wt/AUS/D355/2011/G10P[14] | G10 | P[14] | I2 | R2 | C2 | M2 | A11 | N2 | T6 | E2 | H3 | ″ |
RVA/Human-wt/AUS/SA175/2011/G10P[14] | G10 | P[14] | I2 | R2 | C2 | M2 | A11 | N2 | T6 | E2 | H3 | ″ |
RVA/Human-wt/AUS/SA179/2011/G10P[14] | G10 | P[14] | I2 | R2 | C2 | M2 | A11 | N2 | T6 | E2 | H3 | ″ |
RVA/Human-wt/AUS/V582/2011/G10P[14] | G10 | P[14] | I2 | R2 | C2 | M2 | A11 | N2 | T6 | E2 | H3 | ″ |
RVA/Human-wt/AUS/WDP280/2011/G10P[14] | G10 | P[14] | I2 | R2 | C2 | M2 | A11 | N2 | T6 | E2 | H3 | ″ |
RVA/Human-wt/ITA/PR457/2009/G10P[14] | G10 | P[14] | I2 | R2 | C2 | M2 | A11 | N2 | T6 | E2 | H3 | Medici etal. (2015) |
RVA/Human-tc/GBR/A64/1987/G10P11[14] | G10 | P[14] | I2 | R2 | C2 | M1 | A3 | N2 | T1 | E2 | H3 | Heiman et al. (2008) |
RVA/Human-wt/IND/KOL-29/2014/G10P[14] | G10 | P[14] | I2 | R2 | C2 | M2 | A11 | N2 | T6 | E2 | H3 | Mandal et al. (2016) |
RVA/Human-wt/IND/KOL-383/2014/G10P[14] | G10 | P[14] | I2 | R2 | C2 | M2 | A11 | N2 | T6 | E2 | H3 | ″ |
RVA/Human-wt/VNM/NT0082/2007/G10P[14] | G10 | P[14] | I2 | R2 | C2 | M2 | A3 | N2 | T6 | E2 | H3 | Do etal. (2017) |
RVA/Cow-wt/IND/RUBV81/2006/G10P[14] | G10 | P[14] | I2 | Rx | *Cx | *Mx | *Ax | *Nx | Tx | E2 | H3 | Ghosh et al. (2007) |
RVA/Human-wt/SVN/SI-R241/07/2007/G10P[14] | G10 | P[14] | I2 | Rx | *Cx | *Mx | *Ax | *Nx | Tx | E2 | *Hx | Steyer et al. (2010) |
RVA/Human-wt/SVN/SI-R240/07/2007/G10P[14] | G10 | P[14] | I2 | Rx | *Cx | *Mx | *Ax | *Nx | Tx | E2 | *Hx | ″ |
RVA/Human-wt/SVN/SI-R230/07/2007/G10P[14] | G10 | P[14] | I2 | Rx | *Cx | *Mx | *Ax | *Nx | Tx | E2 | *Hx | ″ |
RVA/Human-wt/SVN/SI-R128/07/2007/G10P[14] | G10 | P[14] | 12 | Rx | *Cx | *Mx | *Ax | *Nx | Tx | E2 | *Hx | ″ |
RVA/Human-wt/SVN/SI-2393/07/2007/G10P[14] | G10 | P[14] | 12 | Rx | *Cx | *Mx | *Ax | *Nx | Tx | E2 | *Hx | ″ |
the genes that are labelled x (instead of numbers) were not available in GenBank.