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. 2017 Oct 23;139(45):16048–16051. doi: 10.1021/jacs.7b08897

Table 2. Kinetic Parameters for Unactivated and Activated OMPDC-Catalyzed Decarboxylation of FOa.

Activator (kcat/Km)Act M–1 s–1b Kd (M)c [(kcat/Km)Act]/Kd M–2 s–1d IBE (kcal/mol)e
HPif (1.6 ± 0.4) × 10–4 0.18 ± 0.05 (8.4 ± 0.4) × 10–4 5.2
D,LG3Pg (7.0 ± 0.7) × 10–4 0.05 ± 0.01 (1.3 ± 0.1) × 10–2 6.8
LG3Pg,h     (9.9 ± 0.2) × 10–4 5.2
DG3Pi     (2.5 ± 0.01) × 10–2 7.2
DE4Pj (1.9 ± 0.2) × 10–2 0.030 ± 0.003 (6.0 ± 0.2) × 10–1 9.0
DR5Pg     ≈3 × 10–5 3.1
a

At 25 °C, pH 7.0 and I = 0.15 (NaCl). The quoted errors are the standard deviations from the least-squares fits of the data.

b

Second-order rate constant for breakdown of E·Act·FO to form FU.

c

Dissociation constant for the activator.

d

Determined as described in the text.

e

Fragment intrinsic binding energy, calculated as −RTlnK (eq 3).

g

See SI.

h

No detectable saturation of OMPDC.

i

Calculated from eq 2, where (kAct) = [(kcat/Km)Act]/Kd from Scheme 3A.