Table 1.
NanoString custom codeset.
| Code classes | Names | Accession # |
|---|---|---|
| Endogenous | ALPL | NM_000478.4 |
| Endogenous | ANGPT1 | NM_001146.3 |
| Endogenous | ANGPT2 | NM_001147.2 |
| Endogenous | BGLAP | NM_199173.3 |
| Endogenous | BMP2 | NM_001200.2 |
| Endogenous | CCL18 | NM_002988.2 |
| Endogenous | CCL22 | NM_002990.3 |
| Endogenous | CCL5 | NM_002985.2 |
| Endogenous | CCR7 | NM_001838.2 |
| Endogenous | CD163 | NM_004244.4 |
| Endogenous | CD80 | NM_005191.3 |
| Endogenous | COL1A1 | NM_000088.3 |
| Endogenous | COL4A1 | NM_001845.4 |
| Endogenous | CTGF | NM_001901.2 |
| Endogenous | IL10 | NM_000572.2 |
| Endogenous | IL1B | NM_000576.2 |
| Endogenous | MGP | NM_000900.2 |
| Endogenous | MMP7 | NM_002423.3 |
| Endogenous | MMP8 | NM_002424.2 |
| Endogenous | MMP9 | NM_004994.2 |
| Endogenous | MRC1 | NM_002438.2 |
| Endogenous | NOTCH1 | NM_017617.3 |
| Endogenous | PDGFB | NM_033016.2 |
| Endogenous | PECAM1 | NM_000442.3 |
| Endogenous | PF4 | NM_002619.2 |
| Endogenous | Runx2 | NM_004348.3 |
| Endogenous | SMAD1 | NM_005900.2 |
| Endogenous | SPP1 | NM_000582.2 |
| Endogenous | TEK | NM_000459.3 |
| Endogenous | TGFB1 | NM_000660.3 |
| Endogenous | TIE1 | NM_005424.2 |
| Endogenous | TIMP3 | NM_000362.4 |
| Endogenous | TNF | NM_000594.2 |
| Endogenous | TNFSF11 | NM_003701.2 |
| Endogenous | VCAN | NM_004385.3 |
| Endogenous | VDR | NM_000376.2 |
| Endogenous | VEGF | NM_001025366.1 |
| Housekeeping | GAPDH | NM_002046.3 |
| Housekeeping | GUSB | NM_000181.1 |
| Housekeeping | HMBS | NM_000190.3 |
| Housekeeping | RPS9 | NM_001013.3 |
| Housekeeping | SDHA | NM_004168.2 |
| Negative | NEG_A | ERCC_00096.1 |
| Negative | NEG_B | ERCC_00041.1 |
| Negative | NEG_C | ERCC_00019.1 |
| Negative | NEG_D | ERCC_00076.1 |
| Negative | NEG_E | ERCC_00098.1 |
| Negative | NEG_F | ERCC_00126.1 |
| Negative | NEG_G | ERCC_00144.1 |
| Negative | NEG_H | ERCC_00154.1 |
| Positive | POS_A | ERCC_00117.1 |
| Positive | POS_B | ERCC_00112.1 |
| Positive | POS_C | ERCC_00002.1 |
| Positive | POS_D | ERCC_00092.1 |
| Positive | POS_E | ERCC_00035.1 |
| Positive | POS_F | ERCC_00034.1 |