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Outline and Validation of LOHHLA for Inference of HLA Class I Allele-Specific Copy Number in Tumors
(A) Schematic of the LOHHLA algorithm.
(B) Comparison of minor allele copy number for ASCAT and LOHHLA.
(C) Venn diagram illustrating LOHHLA and ASCAT comparison for inference of allelic imbalance at HLA locus.
(D) Venn diagram illustrating LOHHLA and ASCAT comparison for inference of LOH at HLA locus.
See also Figures S1 and S2.
