Table 5. Genotype–dependent AA polymorphic sites in RT domain of HBV polymerase gene identified in this study.
rt38 | rt53 | rt54 | rt91 | rt124 | rt126 | rt139 | rt153 | rt221 | rt224 | rt256 | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Ab | Ea | T | D | I | Ka | Na | S | Va | H | T | Ya | I | Lc | Hb | N | Y | H | R | Ya | Da | Ha | N | Q | Qa | R | W | F | Yc | I | Vb | C | S | ||
Genotype A | N = 10 | 10 | 0 | 0 | 0 | 5 | 0 | 0 | 1 | 4 | 0 | 10 | 0 | 10 | 0 | 1 | 9 | 0 | 7 | 0 | 3 | 0 | 0 | 0 | 10 | 0 | 0 | 10 | 0 | 10 | 0 | 10 | 0 | 10 |
Genotype C | N = 24 | 1 | 0 | 23 | 0 | 0 | 0 | 0 | 24 | 0 | 0 | 24 | 0 | 2 | 22 | 2 | 0 | 22 | 24 | 0 | 0 | 1 | 0 | 23 | 0 | 2 | 21 | 1 | 24 | 0 | 22 | 2 | 0 | 24 |
Genotype D | N = 19 | 16 | 1 | 2 | 14 | 0 | 1 | 3 | 1 | 0 | 14 | 2 | 3 | 1 | 18 | 18 | 1 | 0 | 4 | 15 | 0 | 0 | 1 | 18 | 0 | 0 | 19 | 0 | 17 | 2 | 0 | 19 | 17 | 2 |
P value | p < 0.0001 | p < 0.0001 | p < 0.0001 | p < 0.0001 | p < 0.0001 | p < 0.0001 | p < 0.0001 | p < 0.0001 | p < 0.0001 | p < 0.0001 |
A: alanine; E: glutamic acid; T: threonine; D: aspartic acid; I: isoleucine; K: Lysine; N: asparagine; S: serine, H: histidine; Y: tyrosine; R: Arginine; Q: Glutamine; W: Tryptophan; F: Phenylalanine; G: glycine; F: phenylalanine; V: valine; C: cystine.
a Described as naturally occurring polymorphic mutations in this study
b Pretreatment mutation found to be Genotype–dependent AA
c Putative NAr mutation found to be Genotype–dependent AA