Table 1.
Evolutionary Characteristics of EBLV-1
EBLV-1 (n= 82) | EBLV-1a (n = 31) | EBLV-1b (n = 51) | |
---|---|---|---|
Evolution rate | |||
All genomea (11,976 bp) | 4.19 ×10−5 (2.95–5.83 ×10−5) | 3.01×10−5 (1.30–5.60×10−5) | 4.07×10−5 (2.87–5.77×10−5) |
Nucleoprotein (1,353 bp) | 3.51×10−5 (2.47–4.52×10−5) | 2.58×10−5 (0.91–4.13×10−5) | 3.48×10−5 (2.37–4.67×10−5) |
Phosphoprotein (936 bp) | 4.18×10−5 (2.92–5.44×10−5) | 3.33×10−5 (1.11–5.30×10−5) | 3.91×10−5 (2.65–5.33×10−5) |
Matrix (609 bp) | 3.51×10−5 (2.41–4.65×10−5) | 2.72×10−5 (0.92–4.49×10−5) | 3.47×10−5 (2.27–4.85×10−5) |
Glycoprotein (1,575 bp) | 3.83×10−5 (2.72–4.90×10−5) | 2.88×10−5 (1.11–5.30×10−5) | 3.80×10−5 (2.60–5.07×10−5) |
Polymerase (6,384 bp) | 3.84×10−5 (2.74–4.81×10−5) | 2.77×10−5 (0.98–4.31×10−5) | 3.83×10−5 (2.76–5.01×10−5) |
Noncodingb (1,119 bp) | 5.74×10−5 (4.06–7.34×10−5) | 4.20×10−5 (1.43–6.65×10−5) | 5.71×10−5 (4.02–7.67×10−5) |
Inter noncodingc (918 bp) | 5.72×10−5 (4.08–7.40×10−5) | 4.55×10−5 (1.52–7.21×10−5) | 5.37×10−5 (3.69–7.23×10−5) |
TRMCAd | 1,403 (1,219–1,558) | 1,756 (1,679–1,818) | 1,672 (1,572–1,761) |
Mostly complete for all sequences.
All intergenic regions + leader/trailer sequences (nearly complete for all of them).
Only intergenic regions sequences.
95% HPD values are given in the brackets.