Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2017 Dec 8;11:30. doi: 10.1186/s40246-017-0126-2

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s). 2017

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

PMC Copyright notice

Fig. 2 — Linkage disequilibrium and haplotype block analysis for FTO rs2892469, rs1861869, rs17217144, and rs7186521. Data suggest a haplotype for the FTO genomic variants studied herein. SNAP analysis refers to HapMap datasets, while the HaploView v4.2 analysis corresponds to our Greek cohort. The HaploView 4.2 color scheme denotes the following: white (D′ < 1, LOD < 2) and red (D′ = 1, LOD ≥ 2). rs2892469 and rs1861869 are in perfect LD (D′ = 1, LOD = 23.66, r ² = 0.884); rs17217144 and rs7186521 exhibit a strong LD (D′ = 0.882, LOD = 10.1, r ² = 0.738). Block1 is based on confidence intervals, i.e., it was created through 95% of informative comparisons being in “strong LD”