Table 3.
Number of promoter-associated demethylated CpGs
| Demethylating TF | Prom-associated | Prom-nonassociated | All demethyl | % of Prom-associated | p value (Fisher’s exact test) |
|---|---|---|---|---|---|
| RUNX3 | 114 | 1005 | 1119 | 10.19 | 1.93E−10 |
| GATA2 | 47 | 192 | 239 | 19.67 | 1.51E−14 |
| CEBPB | 119 | 670 | 789 | 15.08 | 2.20E−16 |
| MAFB | 46 | 219 | 265 | 17.36 | 3.00E−12 |
| NR4A2 | 79 | 474 | 553 | 14.29 | 6.22E−15 |
| MYOD1 | 135 | 836 | 971 | 13.90 | 2.20E−16 |
| CEBPA | 79 | 710 | 789 | 10.01 | 2.21E−07 |
| TBX5 | 212 | 1629 | 1841 | 11.52 | 2.20E−16 |
| SPI1 | 190 | 930 | 1120 | 16.96 | 2.20E−16 |
| RUNX1 | 27 | 143 | 170 | 15.88 | 5.23E−07 |
| All probes | 26,234 | 459,051 | 485,285 | 5.41 |
“Prom-associated” and “Prom-nonassociated” indicate the number of promoter-associated CpGs and nonpromoter-associated CpG, respectively. “All dimethyl” means total number of demethylated CpGs. p value represents the significance of overrepresentation of promoter-associated CpGs