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. Author manuscript; available in PMC: 2019 Jan 1.
Published in final edited form as: Am J Reprod Immunol. 2017 Oct 14;79(1):10.1111/aji.12774. doi: 10.1111/aji.12774

Figure 3.

Figure 3

Visualization of T cell and dendritic cell diversity. (A) t-SNE map generated from pre-gated CD3+ cells from decidua basalis (D.B), decidua parietalis (D.P), and PBMC (P) data sets (top) and manually gated subsets overlaid onto total CD3+ cells (bottom). (B) Hierarchical clustering of median surface marker expression levels of clusters identified by DensVM. (C) t-SNE map generated from merged data from pre-gated Lin−HLADR+CD16− cells from D.B, D.P, and (P) data sets (top) and indicated cell manually gated subsets overlaid onto total Lin−HLADR+CD16− cells (bottom). (D) Hierarchical clustering of median surface marker expression levels of clusters identified by DensVM.