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. 2017 Dec 11;7:17336. doi: 10.1038/s41598-017-16495-y

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© The Author(s) 2017

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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(A) Pan-genome of P. viridiflava strains calculated in Roary (with blastp at 95%). The inner ring shows the total number of the core genes (present in >99% of the genomes); the middle ring shows the number of shell genes (present in 15–95% of the genomes); the outer rings show the number of genes in the cloud of the pan-genome (present in 1–15% of the genomes), gene annotation of all genes is provided in Table S10. (B) Representing core and unique genes between P. viridiflava CDRTc14 and P. fluorescens WH6, annotation of core genes is provided in Table S9.