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. 2017 Dec 11;7:17336. doi: 10.1038/s41598-017-16495-y

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© The Author(s) 2017

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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BLAST plot of P. viridiflava strains tested for the presence of the pathogenicity island of type III secretion system, where strain ICMP 13104 was used as a reference. For this purpose, a tBLASTn search was performed using the gene products of the pathogenicity cluster against the P. viridiflava genome nucleotide sequences. The scatter plot shows the similarity percentages on the x-axis and the bitscores on the y-axis for each genome, whereas the e-values were transformed as 1/(evalue + 1) so that the size of each point representing a gene product could correlate positively with the e-value significance.