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. Author manuscript; available in PMC: 2018 Dec 1.
Published in final edited form as: Genet Epidemiol. 2017 Nov 7;41(8):811–823. doi: 10.1002/gepi.22083

Fig 1. Accuracy of main prediction methods in simulations using subsets of chromosomes.

Fig 1

We report results for A) 2:1 training sample size ratio (row 1 of Table 1) and B) 1:1 training sample size ratio (row 2 of Table 1). We report prediction accuracies for each of the 5 main prediction methods as a function of M/Msim, where M=232,629 is the total number of SNPs and Msim is the actual number of SNPS used in each simulation: 232,629 (all chromosomes), 68,188 (chromosomes 1-4), 38,412 (chromosomes 1-2), and 19,087 (chromosome 1). Numerical results are provided in S5 Table.