Table 1.
Summary of the RNA-Seq Mapping Results
| Genomic Features |
S. diminutum |
S. taiwanense |
||
|---|---|---|---|---|
| G+ | G– | G+ | G– | |
| Protein-coding; sense | 6,156,996 (93.2) | 6,301,927 (92.6) | 5,494,543 (90.0) | 5,352,681 (85.1) |
| Protein-coding; antisense | 19,068 (0.3) | 20,452 (0.3) | 24,391 (0.4) | 51,600 (0.8) |
| Protein-coding; pseudogene | — | — | 87,893 (1.4) | 175,470 (2.8) |
| tmRNA | 210,223 (3.2) | 222,244 (3.3) | 305,582 (5.0) | 453,486 (7.2) |
| RNaseP (rnpB) | 102,521 (1.6) | 155,919 (2.3) | 95,023 (1.6) | 149,237 (2.4) |
| rRNA | 3,278 (0.1) | 5,308 (0.1) | 10,967 (0.2) | 31,913 (0.5) |
| tRNA | 26,829 (0.4) | 26,091 (0.4) | 26,033 (0.4) | 12,590 (0.2) |
| Intergenic | 88,427 (1.3) | 70,859 (1.0) | 61,894 (1.0) | 61,278 (1.0) |
Note.—Numbers indicate the counts and percentages (in parentheses) of the RNA-Seq reads mapped to specific features in each genome under the two experimental conditions (i.e., G+ and G–).