Table 1.
Genes included in the analysis. The amplicon panel is from Swift Biosciences “Accel-Amplicon 56G Oncology Panel v2”. The number of amplicons (# ampl) for each gene is shown
| gene name | # amp l | gene name | # amp l |
|---|---|---|---|
|
| |||
| ABL1 | 5 | IDH2 | 2 |
| AKT1 | 2 | JAK2 | 2 |
| ALK | 2 | JAK3 | 3 |
| APC | 9 | KDR | 9 |
| ATM | 19 | KIT | 14 |
| BRAF | 2 | KRAS | 3 |
| CDH1 | 3 | MAP2K1 | 5 |
| CDKN2A | 2 | MET | 6 |
| CSF1R | 2 | MLH1 | 1 |
| CTNNB1 | 1 | MPL | 1 |
| DDR2 | 1 | MSH6 | 4 |
| DNMT3A | 1 | NOTCH1 | 3 |
| EGFR (HER1) | 9 | NPM1 | 1 |
| ERBB2 (HER2) | 4 | NRAS | 3 |
| ERBB4 (HER4) | 8 | PDGFRA | 4 |
| EZH2 | 1 | PIK3CA | 11 |
| FBXW7 | 6 | PTEN | 14 |
| FGFR1 | 2 | PTPN11 | 2 |
| FGFR2 | 4 | RB1 | 12 |
| FGFR3 | 6 | RET | 6 |
| FLT3 | 4 | STK11 | 5 |
| FOXL2 | 1 | SMAD4 | 10 |
| GNA11 | 2 | SMARCB1 | 4 |
| GNAQ | 2 | SMO | 5 |
| GNAS | 2 | SRC | 1 |
| HNF1A | 4 | TP53 (P53) | 21 |
| HRAS | 2 | TSC1 | 1 |
| IDH1 | 1 | VHL | 3 |