Table 1.
Number of genes that were statistically significant (adj-p < 0.05) and detected in both platforms.
Test | Illumina | Ion Proton | Cross-Platform Comparison | ||||
---|---|---|---|---|---|---|---|
Total Genes Detected | adj-p < 0.05 | Total Genes Detected | adj-p < 0.05 | Mutual Found | adj-p < 0.05 | adj-p < 0.05 and FC Concordant | |
CA1 vs. CA3 | 18,987 | 5,722 | 19,506 | 3,062 | 18,263 | 2,384 | 2,379 |
CA1 vs. DG | 19,427 | 8,675 | 19,506 | 5,515 | 18,436 | 4,366 | 4,352 |
CA3 vs. DG | 19,870 | 8,903 | 19,972 | 5,589 | 18,929 | 4,647 | 4,642 |
Total Genes Detected are the number of genes detected that were not filtered out by DESeq2 and for which an adj-p-value was computed.