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. 2017 Dec 12;7:17447. doi: 10.1038/s41598-017-17802-3

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© The Author(s) 2017

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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NGS read coverage, Shannon’s diversity index and relationship between DWV-like viruses. (A) Genome organization of DWV and VDV1. (B) Analysis of an NGS library from a single honey bee pupa (Pupa-No-2-MD). Shown are NGS read coverage and average Shannon’s diversity index profiles (100 nt window) for DWV and VDV1. (C) Neighbor-joining phylogenetic tree of the full genome VDV1 and DWV consensus sequences. Bootstrap values for 1000 replicates are shown for the groups with more than 50% bootstrap support.