Table 1.
Pathway | rTCA Cycle | Calvin-Benson-Bassham Cycle | Wood-Ljungdahl Pathway | Dicarboxylate/4-Hydroxy butyrate Cycle | 3-Hydroxy propionate Bicycle | 3-Hydroxy propionate/ 4- Hydroxy butyrate Cycle |
---|---|---|---|---|---|---|
Number of Intermediates | 11 | 9 | 4 | 12 | 13 | 12 |
Intermediates Enumerated | 11 | 3 | 3 | 6 | 9 | 5 |
Compounds Excluded | None | Erythrose1 | Methanol1 | Enol pyruvate3 | Propionic acid1,4 | Acrylic acid4 |
Ribose1 | Succinic semialdehyde1,4 | Methylmalic acid1 | Propionic acid1,4 | |||
Ribulose1 | Crotonic acid1,4 | Mesaconic acid4 | Crotonic acid1,4 | |||
Xylulose1 | Acetoacetic acid1,4 | Citramalic acid1 | Acetoacetic acid1,4 | |||
Fructose1 | 3-Hydroxy butyric acid1,4 | Succinic semialdehyde1,4 | ||||
Sedoheptulose1,2 | 4-Hydroxy butyric acid1,4 | 4-Hydroxybutyric acid1,4 | ||||
4-Hydroxy butyric acid1,4 |
The reasons for their exclusion are given as superscripts in the table and annotated here: 1. H/O ratio violation; 2. C atom number violation; 3. disallowed enol tautomer; 4. C/O ratio violation.