Table I.

Differentially expressed genes in luminal B2 breast cancer.

A, Top 15 upregulated genes
Gene symbol	Gene ID	P-value	FDR
MMP11	4320	1.23×10−32	7.06×10−30
COL10A1	1300	1.14×10−31	6.02×10−29
NEK2	4751	2.03×10−22	4.39×10−20
COL11A1	1301	1.07×10−21	2.02×10−19
PPAPDC1A	196051	1.04×10−20	1.79×10−18
INHBA	3624	7.51×10−20	1.17×10−17
KIF4A	24137	1.70×10−19	2.54×10−17
UBE2C	11065	3.61×10−19	5.29×10−17
WISP1	8840	7.36×10−19	1.04×10−16
FN1	2335	7.50×10−19	1.05×10−16
IBSP	3381	2.99×10−18	3.92×10−16
PLK1	5347	4.13×10−18	5.25×10−16
TPX2	22974	5.67×10−18	6.98×10−16
IQGAP3	128239	1.12×10−17	1.31×10−15
HSD17B6	8630	1.65×10−17	1.87×10−15
B, Top 15 downregulated genes
Gene symbol	Gene ID	P-value	FDR
DMD	1756	8.19×10−72	8.22×10−68
SYNM	23336	2.04×10−68	1.37×10−64
FMO2	2327	3.72×10−63	1.87×10−59
SFRP1	6422	4.64×10−57	1.86×10−53
MYH11	4629	1.16×10−56	3.87×10−53
COL17A1	1308	3.89×10−54	1.11×10−50
FAT2	2196	2.20×10−53	5.52×10−50
EGFR	1956	3.05×10−52	6.81×10−49
CX3CL1	6376	2.70×10−50	5.42×10−47
SAMD5	389432	3.28×10−47	5.98×10−44
NDRG2	57447	7.56×10−47	1.26×10−43
GRIA4	2893	1.85×10−46	2.85×10−43
EPHB1	2047	6.87×10−45	9.85×10−42
MAMDC2	256691	2.88×10−44	3.86×10−41

FDR, false discovery rate.