Table 2. Predicted SUMOylation sites in the nonstructural and structural proteins of PRRSV.
Proteins of PRRSV | SUMOSp1.0a | SUMOplot | seeSUMO |
---|---|---|---|
Nsp1α | Mb | L | Y |
Nsp1β | H | H | Y |
Nsp2 | H | H | Y |
Nsp3 | - | - | Y |
Nsp4 | M | H | Y |
Nsp5 | - | - | Y |
Nsp6 | L | - | Y |
Nsp7 | L | H | - |
Nsp8 | - | - | Y |
Nsp9 | H | H | Y |
Nsp10 | L | - | Y |
Nsp11 | L | H | Y |
Nsp12 | - | - | Y |
ORF2a | - | - | Y |
ORF2b | - | - | Y |
ORF3 | - | H | Y |
ORF4 | - | L | Y |
ORF5 | - | H | Y |
ORF6 | H | H | Y |
ORF7 | - | L | Y |
a Three web servers for sequence-based prediction of protein sumoylation sites.
b H, M, L and Y represents High, Medium, Low threshold and YES respectively; —means undetected.