Table 1. Sequence variations detected in strain 3725.
| Variations common to the parental (wt) and 3725 strains (relative to the published 168 sequence) | Variations in ΔmreB 3725 relative to its parental wild type 168 strain | |
|---|---|---|
| Variations in strain 3725 also reported in strain PDC134 | Variations unique to strain 3725 | |
| INTRAGENIC | INTRAGENIC | INTRAGENIC |
| uvrX | sepF | parC |
| rrnI-16S | walR | rRNA23S |
| trnI-asn | ytpS (= sftA) | ylyB |
| rrnG-16S | epsC | trmD |
| rrnB-16S | comP | pksN |
| pstS (5’UTR) | sigI | oppD |
| ydzN (5’UTR) | bscR (= FatR) | gerAA |
| yjpA (3’UTR) | ymfD | s1255/sspG |
| yjpA (3’UTR) | mmgA | accC |
| zwf (ter) | yuxG (= rahEW) | glcK |
| zwf (ter) | ydcH | gltA |
| zwf (ter) | yhgE | sacA |
| zwf (ter) | yisQ & S389 | ilvC & s1070 |
| ywbD (ter) | yjcM & S430 | yoqA |
| synonymous codon (silent) | BSU_misc_RNA_20 | yqbS |
| uvrX | panE | yesY |
| uvrX | BSU_misc_RNA_28 | yutE |
| yxbD | synonymous codon (silent) | |
| pgdS | ||
| rluB | ||
| yqeZ | ||
| ygaN | ||
| yozT | ||
| INTERGENIC | INTERGENIC | INTERGENIC |
| int (up trnI-asn) | s1123 (5’utr NifZ)/s1124 (5’utr braB) | int bsrB/yrvM |
| int (up trnI-asn) | s1145 (5’ utr ytnP) | s1101 (5’ utr CitZ) |
| int (dn trnI-gly) | s125 (5’ utr hxlR) | s1101 (5’ utr CitZ) |
| int (dn trnI-ala) | s486 (5’ UTR mtnE) | |
| int (s1555/purA) | int yorN/yorM | |
| int (yocK/azoR1) | s352 (3’ Utr yhaH) | |
| s1417 | s736 (dnstream yocJ) | |
| int (ydgF/dinB) | s596 (5’utr ylxY) | |