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. 2017 Dec 4;13(12):e1005865. doi: 10.1371/journal.pcbi.1005865

Table 1. Feature comparison of pSSAlib with other exact SSA simulation packages.

(SBML: supports SBML model input, pSSA: provides partial-propensity SSAs, Diffusion: provides spatiotemporal stochastic reaction-diffusion, Delays: provides chemical reactions with time delays, Events: provides event triggers).

Software package SBML pSSA Diffusion Delays Events
pSSAlib 2.0.0 Cartesian NSM
libRoadRunner 1.3.0 [29]
StochKit 2.0.13 [28]
Cain 1.10 [27]
URDME 1.3 [30] Tetrahedral NSM