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Sequence and structural comparison of PrV and HSV-1/HCMV/EBV gB ectodomains
| Comparison | Sequence identity (%)a | nA/nTb | RMSD (Å)c |
|---|---|---|---|
| PrV vs HSV-1 | 50.1 | 524/568 | 1.04 |
| PrV vs HCMV | 25.6 | 508/535 | 3.39 |
| PrV vs EBV | 25.3 | 496/530 | 3.72 |
Percent identity was calculated using the shorter sequence as the denominator.
nA and nT, numbers of aligned and total atoms, respectively.
The RMSDs were calculated for C-α atoms in PyMOL (103).
