Table 3.
Groups of DEFLs analyzed for natural selection
| Groupa | Sequences | Lengthb | CRP groups includedc | Known DEFL-genesd |
|---|---|---|---|---|
| S117 | 9 | 267 | CRP0000 | LCR76, LCR75 |
| S116 | 13 | 249 | CRP0000 | PDF2.4, PDF2.2, PDF2.1, PDF2.3,PDF2.6 |
| S44 | 8 | 279 | CRP0220 | |
| S19 | 9 | 267 | CRP0220 | |
| S114 | 10 | 249 | CRP0240 | |
| S125 | 6 | 300 | CRP0260 | |
| S107 | 6 | 249 | CRP0300 | |
| S94 | 8 | 243 | CRP0300 | |
| S89 | 9 | 285 | CRP0300 | |
| S95 | 9 | 249 | CRP0300 | |
| S100 | 9 | 273 | CRP0300 | |
| S43 | 7 | 294 | CRP0340 | LCR85 |
| S78 | 8 | 255 | CRP0360 | |
| S87 | 8 | 327 | CRP0360 | |
| S81 | 9 | 282 | CRP0360 | |
| S6 | 7 | 228 | CRP0500 | |
| S8 | 10 | 240 | CRP0500 | LCR52, LCR53, LCR55, LCR56 |
| S132 | 7 | 240 | CRP0500, CRP0560 | LCR3, LCR6, LCR20 |
| S130 | 7 | 315 | CRP0570 | LCR11, LCR17 |
| S12 | 6 | 237 | CRP0580 | LCR24, LCR37, LCR38 |
| S13 | 9 | 231 | CRP0580 | LCR25, LCR26, LCR27 |
| S65 | 17 | 264 | CRP0580 | LCR21, LCR22, LCR23, LCR35, LCR36 |
| S25 | 11 | 273 | CRP0660 | LCR60, LCR61, LCR62, LCR63 |
| S17 | 10 | 396 | CRP0670 | PDF3.1, PDF3.2, LCR57, LCR58 |
| S9 | 12 | 261 | CRP0680 | LCR18, LCR39, LCR40, LCR41, LCR42 |
| S124 | 15 | 318 | CRP0700 | ATTI1, ATTI2, ATTI3, ATTI4 |
| S126 | 6 | 240 | CRP0770 | |
| S42 | 7 | 261 | CRP0770 | |
| S57 | 7 | 294 | CRP0810 | |
| S1 | 8 | 357 | CRP0810 | |
| S26 | 9 | 288 | CRP0810 | LURE1.2, LURE1.3, LURE1.4, LURE1.5 |
| S54 | 6 | 270 | CRP0830 | SCRL24, SCRL25 |
| S63 | 7 | 315 | CRP0830 | SCRL17, SCRL18, SCRL19 |
| S56 | 8 | 282 | CRP0830 | SCRL1, SCRL2 |
| S62 | 6 | 291 | CRP0860 | SCRL12, SCRL13 |
| S28 | 10 | 390 | CRP0860 | SCRL4, SCRL5, SCRL6, SCRL7, SCRL8 |
| S122 | 8 | 270 | CRP0920 | |
| S2 | 6 | 312 | CRP0940 | |
| S70 | 9 | 276 | CRP0940 | |
| S82 | 6 | 252 | CRP0960 | |
| S73 | 9 | 264 | CRP0960 | |
| S109 | 6 | 255 | CRP0980 | |
| S71 | 9 | 309 | CRP1050 | |
| S74 | 6 | 363 | CRP1100 | |
| S68 | 6 | 294 | CRP1110 | |
| S66 | 7 | 321 | CRP1120 | |
| S119 | 12 | 258 | CRP0090 | PDF1.1, PDF1.2a, PDF1.2.b, PDF1.2c, PDF1.3, AhPDF1.3 |
| 8.37 (±2.37)e | 282.06 (±39.41) |
aOnly groups with six or more sequences were analyzed. Group designation is arbitrary
bTotal length of multiple sequence nucleotide alignment including positions with indels
cGroups of CRPs represented in each alignment, as defined for A. thaliana in [29]
d ATTI Arabidopsis thaliana trypsin inhibitor, CRP Cysteine-Rich-Peptide, LCR Low molecular weight Cysteine-Rich Peptide, PDF Plant Defensin, PR Pathogenesis-Related
eAverage and sample standard deviation