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. Author manuscript; available in PMC: 2018 Nov 16.
Published in final edited form as: Cell. 2017 Oct 26;171(5):1176–1190.e17. doi: 10.1016/j.cell.2017.10.015
REAGENT or RESOURCE SOURCE IDENTIFIER
Bacterial and Virus Strains
AAV5.CaMKIIα.GCaMP6m Grewe et al., 2017 N/A
AAV5. EF1α. Flex. mCherry Penn Vector Core N/A
Chemicals, Peptides, and Recombinant Proteins
L-368,899 hydrochloride TOCRIS 26-411-0
Critical Commercial Assays
RNAscope Fluorescent Multiplex Reagent Kit Advanced Cell Diagnostics 320850
RNAscope probe Mm-Slc32a1 Advanced Cell Diagnostics 319191
RNAscope Probe Mm-Slc17a6-C2 Advanced Cell Diagnostics 319171-C2
RNAscope Probe Mm-Oxtr-C3 Advanced Cell Diagnostics 402651-C3
Experimental Models: Organisms/Strains
Mouse: wild type C57BL/6J Jackson Laboratory JAX:000664
Mouse: Vgat-ires-Cre Watabe-Uchida et al., 2012 N/A
Mouse: Vglut2-ires-Cre Krashes et al., 2014 N/A
Software and Algorithms
ImageJ NIH https://imagej.nih.gov/ij/
Cellprofiler Broad Institute http://cellprofiler.org/
MATLAB MathWorks https://www.mathworks.com/products/matlab.html
Ca2+ signal acquision nVista https://www.inscopix.com/
Cellsort MATLAB algorithm for extracting cellular Ca2+ signals Ziv et al., 2013 N/A
Registration of cell identities across imaging sessions Grewe et al., 2017 N/A
Fast nonnegative deconvolution Vogelstein et al., 2010 N/A
Other
0.85-mm custom GRIN lens Grintech http://www.grintech.de/
Miniatureized microscope camera Inscopix https://www.inscopix.com/