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. 2017 Dec 15;7:17665. doi: 10.1038/s41598-017-17751-x

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© The Author(s) 2017

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Differential gene expression of Mtb H37Rv in every stage of growth in presence of lipids. Dextrose conditions were used as controls. The heatmap and volcano plots are shown in figure (A) for the 1241 differentially expressed genes in LE, figure (B) shows the 2043 differentially expressed genes in LS and figure (C) shows the 138 differentially expressed genes in LNRP1. Normalized counts in the heatmap were rescaled between −3 and 3 with clustering based on Pearson correlation and differentially expressed genes were considered significant using a false discovery rate of <0.05 and a log₂ fold change >1 or <−1.