Table 5.1.
Gene | MOPS complete | MOPS minimal | MOPS complete |
---|---|---|---|
Without methionine | |||
ftsA | 984 | 575 | 1013 |
ftsB | 487 | 140 | 173 |
ftsE | 967 | 320 | 649 |
ftsI | 349 | 144 | 226 |
ftsK | 508 | 213 | 376 |
ftsL | 416 | 201 | 423 |
ftsN | 871 | 269 | 405 |
ftsP | 905 | 196 | 410 |
ftsQ | 336 | 147 | 172 |
ftsW | 293 | 117 | 169 |
ftsX | 838 | 244 | 436 |
ftsZ | 6750 | 3335 | 5290 |
zipA | 2128 | 501 | 874 |
minC | 857 | 364 | 575 |
minD | 5358 | 2444 | 3324 |
minE | 3597 | 1970 | 2680 |
matP | 601 | 360 | 347 |
slmA | 2323 | 568 | 952 |
zapA | 2275 | 738 | 2008 |
zapB | 34,197 | 7797 | 18,090 |
ZapC/YcbW | 155 | 155 | 155 |
ZapD/YacF | 1983 | 373 | 538 |
ZapE/YhcM | 255 | 214 | 262 |
mreB | 11,304 | 2393 | 5570 |
mreC | 738 | 176 | 333 |
mreD | 367 | 71 | 148 |
rodZ | 1309 | 576 | 669 |
This study used ribosome profiling to determine the rate of translation of 95% of the proteins in E. coli. The rates were converted to number of protein molecules synthesized in one cell cycle. Assuming no unusual degradation, the numbers can be taken as the average number of molecules per cell. The E. coli strain MG1655 was grown at 37 °C in three different media with different doubling times: 21.5 and 56.3 min in MOPS complete and incomplete media, and 26.5 min in MOPS complete without methionine. The latter condition required the cell to substantially upregulate the met-E enzyme, altering overall metabolism. We have extracted cell division and cytoskeleton proteins from their table S1. It seems quite valuable to have these numbers determined for all proteins in the identical cell and growth conditions. The 6750 molecules of FtsZ in a cell volume of 2 × 10−15 L is 5.6 μM