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. 2017 Dec 15;84(1):e01739-17. doi: 10.1128/AEM.01739-17

TABLE 4.

Primers used in this study

Name Oligonucleotide sequence (5′ to 3′)a Purpose
cah_UFP1 tctcttgcgtgactgctctactgttaatagaataaaacgatcgataaaacCAACAAAGCCACGTTGTGTC Deletion of cah
cah_DRP2 accgtcatcatccttaacatcaacggaagaatggcctgcagcaccatacaTCCCGTCAAGTCAGCGTAAT Deletion of cah
cah-UFHindIII gatcaagcttatcactgacctgcccg Cloning of cah
cah-DRBamHI gatcggatccatccccggtttgctgc Cloning of cah
pBBR1MCS-F gttttcccagtcacgacgtt Specific to plasmid pBBR1MCS, upstream of the MCSb site
pBBR1MCS-R ggctcgtatgttgtgtggaa Specific to plasmid pBBR1MCS, downstream of the MCS site
cah-F1 atgcccctcctgtttctctt Sequencing of cloned cah
cah-F2 accacaaatggtcgtcaggt Sequencing of cloned cah
cah-F3 ggtaaggctgacggtgttgt Sequencing of cloned cah
cah-F4 gttgtggatgcacagaatgg Sequencing of cloned cah
cah-F5 ggagccacaactgcagtaca Sequencing of cloned cah
cah-R1 ttcagaactgcggtgaacag Sequencing of cloned cah
cah-R2 gacataccggcaacctctgt Sequencing of cloned cah
cah-R3 gatgtccgacagtggtgttg Sequencing of cloned cah
cah-R4 ccactgctcgcctctgttat Sequencing of cloned cah
cah-R5 cgcaggccattaaccactat Sequencing of cloned cah
a

Nucleotides in uppercase font are specific to gene replacement vector pACYC177, and nucleotides in bold lowercase font represent the endonuclease restriction sites incorporated in the primers to facilitate cloning.

b

MCS, multiple-cloning site.