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. 2017 Dec 15;84(1):e01443-17. doi: 10.1128/AEM.01443-17

TABLE 2.

Quantitative PCR primers used for taxonomic quantification of 16S rRNA gene

Primer name Sequence Target Reference Amplification efficiency (%)
A915f GTGCTCCCCCGCCAATTCCT Archaea 76
A1059r GCCATGCACCWCCTCT Archaea 77 59
B340f TCCTACGGGAGGCAGCAGT Bacteria 78
B515r CGTATTACCGCGGCTGCTGGCAC Bacteria 78 73
ANME-2-240f CTATCAGGTTGTAGTGGG ANME-2 79
ANME-2-538r CGGCTACCACTCGGGCCGC ANME-2 79 95
ANME-1-830r TCGCAGTAATGCCAACAC ANME-1 79
ANME-1-628f GCTTTCAGGGAATACTGC ANME-1 79 101
A1100f TGGGTCTCGCTCGTTG Methanomicrobiales 71
MG1200r CGGATAATTCGGGGCATGCTG Methanomicrobiales 71 124
MSMX860f AGGGAAGCCGTGAAGCGCC Methanosarcinales 71
A1100r TGGGTCTCGCTCGTTG Methanosarcinales 71 51