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. 2017 Dec 18;12(12):e0190030. doi: 10.1371/journal.pone.0190030

Table 1. Summary data of whole genome sequencing using Illumina HiSeq 2000 machine and aligned to the reference sheep genome (Oar3.1) using BWA-MEM.

Ram A Affected 1 Affected 2 Dam of affected 1 Dam of affected 2
Total Reads Mbp 284 192 199 232 231
Mean quality score (PF) 37.4 37.1 36.8 36.9 36.7
% ≥ Q30 93.4 92.4 91.5 91.8 90.9
Reads mapped % 84 84 83 84 81
Mean genome coverage 12.7 8.6 8.9 10.4 10.1