Table 1. Primer sequences (complementary to the coding sequence) used in PCR to generate mutations in the gB epitope (SSIEFARL) region.
Name | Resulting Mutation | Reverse primers used* |
---|---|---|
WT | SSIEFARL (none) | 5’ GTT GTA CGT AAA CTG CAG CCT GGC GAA CTC GAT GGA GGA GGT GGT CTT GAT GCG CTC CA 3’ |
L8A | SSIEFARA | 5 ‘ GTT GTA CGT AAA CTG agc CCT GGC GAA CTC GAT GGA GGA GGT GGT CTT GAT GCG CTC CA 3’ |
F5L | SSIELARL | 5’ GTT GTA CGT AAA CTG CAG CCT GGC cAA CTC GAT GGA GGT GGT CTT GAT GCG CTC CA 3’ |
S1G | GSIEFARL | 5’ GTT GTA CGT AAA CTG CAG CCT GGC GAA CTC GAT GGA ccc GGT CTT GAT GCG CTC CA 3’ |
S1L | LSIEFARL | 5’ GTT GTA CGT AAA CTG CAG CCT GGC GAA CTC GAT GGA caa GGT GGT CTT GAT GCG CTC CA 3’ |
S1G/L8A | GSIEFARA | 5’ GTT GTA CGT AAA CGT agc CCT GGC GAA CTC GAT GGA ccc GGT GGT CTT GAT GCG CTC CA 3’ |
S1G/I3A | GSAEFARL | 5’ GTT GTA CGT AAA CTG CAG CCT GGC GAA CTC Ggc GGA ccc GGT GGT CTT GAT GCG CTC CA 3’ |
L8A/R7K | SSIEFAKA | 5’ GTT GTA CGT AAA CGT agc CtT GGC GAA CTC GAT GGA GGA GGT GGT CTT GAT GCG CTC CA 3’ |
S1G/I3N/F5L/E4S(SIFE) | GSNSLARL | 5’ GTT GTA CGT AAA Ctg CAG CCT GGC cAA gct GtT GGA ccc GGT GGT CTT GAT GCG CTC CA 3’ |
*The restriction site of SnaBI used in cloning is shown in bold. Changes from the wild type sequence are shown in lower case letters.