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Validation rate and breakpoint accuracy of VaPoR on the 1000 Genomes Project phase 3 calls. VaPoR was applied on 5 individuals with reported SVs as a truth set: HG00513, HG00731, HG00732, NA19238, NA19239. The validation rates of deletions (a) and insertions (b) are shown here across different cutoff scores for VaPoR. Robustness to breakpoint accuracy was assessed by deviating breakpoints from their actual positions across varying distances for deletions (c) and insertions (d).
