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. 2017 Sep 25;9(10):2893–2910. doi: 10.1093/gbe/evx202

Table 1.

Genome Features of Several Sodalis Symbionts Ordered by Genome Size

Organism Host Short Name Accession Contigs Genome (Mb) GC (%) CDS|ψ CDS (%) rRNAs|tRNAs|ncRNAs
Ca. Mikella endobia Mealybug MiEn LN999831 1 0.35 30.6 273|7 75, 5 3|41|6
Ca. Moranella endobia PCVAL Mealybug MoEn NC_021057 1 0.54 43.5 411|15 76, 2 5|41|1
Ca. Moranella endobia PCIT Mealybug MoPC CP002243 1 0.54 43.5 406|29 77 5|41|0
Ca. Hoaglandella endobia Mealybug HoEn LN999835 1+2 0.64c 42.8 517|16 80, 4 3|41|10
Ca. Doolittlea endobia Mealybug DoEn LN999833 1+1 0.85c 44.2 568|99 59, 8 3|41|11
Ca. Gullanella endobia Mealybug GuEn LN999832 1 0.94 28.9 461|29 48, 1 3|39|7
S-endosymbiont of Heteropsylla cubana Psyllid SoHc NC_018420 1 1.12 28.9 532|19 47, 3 3|38|2
Sodalis-like symbiont of Philaneus spumarius PSPU Froghopper SoPSb BASS01000000 562 1.38 54.1 1400|NA NA 4|39|44
S-endosymbiont of Ctenarytaina eucalypti Psyllid SoCe NC_018419 1 1.44 43.3 758|21 47, 9 3|40|2
P-endosymbiont of Henestaris halophilus True bug SoBaa PRJEB12882 1 1.62 44.5 713|166 37, 3 3|42|10
Sodalis-like endosymbiont of Proechinophthirus fluctus str. SPI-1 Seal louse SoPf LECR01000000 92 2.18 50 695|683 NA 16|40|2
Sodalis glossinidius str. “morsitans” Tsetse fly SoGl NC_007712-15 1+3 4.29c 54.7 3177|1280 52, 9 22|72|1
Ca. Sodalis pierantonius str. SOPE Weevil SOPE CP006568 1 4.51 56 2309|1771 46, 2 9|55|3
Ca. Sodalis melophagi Hippoboscid louse fly SoMeb http://users.prf.jcu.cz/novake01/d 236 4.57 50.8 4545|NA NA NA
Sodalis praecaptivus Human wound SoHS NZ_CP006569-70 1 4.16c 57.5 4429|25 81 23|76|1
a

The acronym refers to the proposed name Ca. Sodalis baculum sp. nov. strain kilmister see below. It is introduced here to have a consistent abbreviation in each part.

b

No annotation available, annotation was done using prokkav1.12 with default parameters plus gram negative and metagenome options (Seemann et al. 2014).

c

Including plasmids.

d

Last accessed September 29, 2017.