Table 1.
Organism | Host | Short Name | Accession | Contigs | Genome (Mb) | GC (%) | CDS|ψ | CDS (%) | rRNAs|tRNAs|ncRNAs |
---|---|---|---|---|---|---|---|---|---|
Ca. Mikella endobia | Mealybug | MiEn | LN999831 | 1 | 0.35 | 30.6 | 273|7 | 75, 5 | 3|41|6 |
Ca. Moranella endobia PCVAL | Mealybug | MoEn | NC_021057 | 1 | 0.54 | 43.5 | 411|15 | 76, 2 | 5|41|1 |
Ca. Moranella endobia PCIT | Mealybug | MoPC | CP002243 | 1 | 0.54 | 43.5 | 406|29 | 77 | 5|41|0 |
Ca. Hoaglandella endobia | Mealybug | HoEn | LN999835 | 1+2 | 0.64c | 42.8 | 517|16 | 80, 4 | 3|41|10 |
Ca. Doolittlea endobia | Mealybug | DoEn | LN999833 | 1+1 | 0.85c | 44.2 | 568|99 | 59, 8 | 3|41|11 |
Ca. Gullanella endobia | Mealybug | GuEn | LN999832 | 1 | 0.94 | 28.9 | 461|29 | 48, 1 | 3|39|7 |
S-endosymbiont of Heteropsylla cubana | Psyllid | SoHc | NC_018420 | 1 | 1.12 | 28.9 | 532|19 | 47, 3 | 3|38|2 |
Sodalis-like symbiont of Philaneus spumarius PSPU | Froghopper | SoPSb | BASS01000000 | 562 | 1.38 | 54.1 | 1400|NA | NA | 4|39|44 |
S-endosymbiont of Ctenarytaina eucalypti | Psyllid | SoCe | NC_018419 | 1 | 1.44 | 43.3 | 758|21 | 47, 9 | 3|40|2 |
P-endosymbiont of Henestaris halophilus | True bug | SoBaa | PRJEB12882 | 1 | 1.62 | 44.5 | 713|166 | 37, 3 | 3|42|10 |
Sodalis-like endosymbiont of Proechinophthirus fluctus str. SPI-1 | Seal louse | SoPf | LECR01000000 | 92 | 2.18 | 50 | 695|683 | NA | 16|40|2 |
Sodalis glossinidius str. “morsitans” | Tsetse fly | SoGl | NC_007712-15 | 1+3 | 4.29c | 54.7 | 3177|1280 | 52, 9 | 22|72|1 |
Ca. Sodalis pierantonius str. SOPE | Weevil | SOPE | CP006568 | 1 | 4.51 | 56 | 2309|1771 | 46, 2 | 9|55|3 |
Ca. Sodalis melophagi | Hippoboscid louse fly | SoMeb | http://users.prf.jcu.cz/novake01/d | 236 | 4.57 | 50.8 | 4545|NA | NA | NA |
Sodalis praecaptivus | Human wound | SoHS | NZ_CP006569-70 | 1 | 4.16c | 57.5 | 4429|25 | 81 | 23|76|1 |
The acronym refers to the proposed name Ca. Sodalis baculum sp. nov. strain kilmister see below. It is introduced here to have a consistent abbreviation in each part.
No annotation available, annotation was done using prokkav1.12 with default parameters plus gram negative and metagenome options (Seemann et al. 2014).
Including plasmids.
Last accessed September 29, 2017.