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. 2017 Sep 13;9(10):2791–2811. doi: 10.1093/gbe/evx189

Fig. 3.

Fig. 3.

—Phylogeny and conserved genomic neighborhoods of ribosomal protein S10 and its paralog. (A) Schematic phylogenetic tree of the S10 ribosomal protein family in Bacteria and Archaea. Collapsed branches are shown by triangles and denoted by the taxon name. Color code: Archaea, black; Bacteria, light blue. (B) Schematic phylogenetic tree of the S10 ribosomal protein family in Archaea. Collapsed branches are shown by triangles and denoted by the taxon name. The branch identified as fast evolving is shown by a green rectangle and the regular branch—by gray rectangle. Color code: Euryarchaeota, dark blue; Crenarchaeota, light blue; Thaumarchaeota and Caldiarchaeum subterraneum, magenta; Korarchaeota, brown; Nanoarchaeota, pink. The conserved gene neighborhoods are shown next to the respective branches. Genes in these neighborhoods are shown schematically by arrows (not to scale). Abbreviations: RpsJ, ribosomal protein S10; TEF1, translation elongation factor EF-1 alpha, GTPase; FusA, translation elongation factor G, EF-G (GTPase); RpsG, ribosomal protein S7; AbgB, metal-dependent amidase/aminoacylase/carboxypeptidase; 1078, arCOG01078 NUDIX family hydrolase.