Table 1.
MIGS ID | Property | Term | Evidence codea |
---|---|---|---|
Classification | Domain Bacteria | TAS [47] | |
Phylum Proteobacteria | TAS [48] | ||
Class Gammaproteobacteria | TAS [49, 50] | ||
Order Enterobacterales | TAS [51] | ||
Family Pectobacteriaceae | TAS [51] | ||
Genus Pectobacterium | TAS [52, 53] | ||
Species Pectobacterium carotovorum | TAS [52, 54] | ||
Strain: SCC1 (10.1601/strainfinder?urlappend=%3Fid%3DCFBP+8537) | TAS [5] | ||
Gram stain | Negative | IDA | |
Cell shape | Rod | IDA | |
Motility | Motile | IDA | |
Sporulation | Non-sporulating | NAS [51] | |
Temperature range | Mesophile, able to grow at 37 °C | TAS [14] | |
Optimum temperature | ~28 °C | IDA | |
pH range; Optimum | Unknown | ||
Carbon source | Sucrose, lactose, melibiose, raffinose | IDA,TAS [14] | |
MIGS-6 | Habitat | Potato | TAS [5] |
MIGS-6.3 | Salinity | Able to grow in 5% NaCl | TAS [14] |
MIGS-22 | Oxygen requirement | Facultatively anaerobic | NAS [51] |
MIGS-15 | Biotic relationship | Free-living | NAS |
MIGS-14 | Pathogenicity | Pathogenic | NAS [53] |
MIGS-4 | Geographic location | Finland | TAS [5] |
MIGS-5 | Sample collection | 1982 | NAS |
MIGS-4.1 | Latitude | 60° 13′ 36.15” N | NAS |
MIGS-4.2 | Longitude | 25° 00′ 54.77″ E | NAS |
MIGS-4.4 | Altitude | Unknown |
aEvidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [55]