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. 2017 Dec 20;12:87. doi: 10.1186/s40793-017-0301-z

Table 1.

Classification and general features of Pectobacterium carotovorum strain SCC1 [46]

MIGS ID Property Term Evidence codea
Classification Domain Bacteria TAS [47]
Phylum Proteobacteria TAS [48]
Class Gammaproteobacteria TAS [49, 50]
Order Enterobacterales TAS [51]
Family Pectobacteriaceae TAS [51]
Genus Pectobacterium TAS [52, 53]
Species Pectobacterium carotovorum TAS [52, 54]
Strain: SCC1 (10.1601/strainfinder?urlappend=%3Fid%3DCFBP+8537) TAS [5]
Gram stain Negative IDA
Cell shape Rod IDA
Motility Motile IDA
Sporulation Non-sporulating NAS [51]
Temperature range Mesophile, able to grow at 37 °C TAS [14]
Optimum temperature ~28 °C IDA
pH range; Optimum Unknown
Carbon source Sucrose, lactose, melibiose, raffinose IDA,TAS [14]
MIGS-6 Habitat Potato TAS [5]
MIGS-6.3 Salinity Able to grow in 5% NaCl TAS [14]
MIGS-22 Oxygen requirement Facultatively anaerobic NAS [51]
MIGS-15 Biotic relationship Free-living NAS
MIGS-14 Pathogenicity Pathogenic NAS [53]
MIGS-4 Geographic location Finland TAS [5]
MIGS-5 Sample collection 1982 NAS
MIGS-4.1 Latitude 60° 13′ 36.15” N NAS
MIGS-4.2 Longitude 25° 00′ 54.77″ E NAS
MIGS-4.4 Altitude Unknown

aEvidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [55]