Table 1. Module network graph statistics.
Module | Season | Total oligotypes | SparCC cor threshold 2011a | SparCC cor threshold 2012a | Intersecting vertices (%)b | Intersecting edges (%)b |
---|---|---|---|---|---|---|
2 | Autumn | 584 | 0.51 | 0.58 | 72.6 | 44.7 |
7 | Winter | 458 | 0.53 | 0.55 | 74.9 | 48.7 |
5 | Winter–Spring | 628 | 0.51 | 0.56 | 74.6 | 35.9 |
1 | Spring | 622 | 0.61 | 0.61 | 72.7 | 40.2 |
4 | Spring–Summer | 538 | 0.62 | 0.57 | 74.1 | 48.7 |
3 | Summer | 580 | 0.52 | 0.59 | 53 | 32 |
8 | Summer–Autumn | 254 | 0.5 | 0.55 | 67 | 48.2 |
SparCC correlation thresholds were determined according to an analysis of network deconstruction across different thresholds (Supplementary Figure S12).
Intersecting vertices and edges were calculated using igraph (Csardi and Nepusz, 2006).