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. 2017 Sep 26;12(9):751–763. doi: 10.1080/15592294.2017.1356957

Table 2.

Clinical samples used in the study.

  DNA methylation analysis
 
      In silico analysis
 
    Pyrosequencing ML Methylcapture sequencing data Methylation array data from TCGA data Methylation array data from GEO (GSE48684) Protein expression analysis
Colorectal tissue Normal   11     17 11
  NAT 15   6 39    
  Adenoma 15 11 15   42 11
  CRC 15 10 9 39 64 10
Plasma Normal   47        
  Adenoma   37        
  CRC   37        
  45 153 30 78 123 32

ML: MethyLight reaction; NAT: Normal adjacent tissue; CRC: Colorectal cancer; TCGA: The Cancer Genome Atlas; Gene Expression Omnibus