Table 1.
Pathovar | Strain | Group | Source | Genbank accession |
∧Pathogenicity to: |
Epiphytic ability | |
---|---|---|---|---|---|---|---|
Whiteflies | Aphids | (CFU/10 leaf disks) | |||||
tomato | DC3000∗1 | 1 | Solanum lycopersicum | AE016853 | Low | Medium | 1.98 × 106 |
syringae | B728a∗2 | 2 | Phaseolus vulgaris | CP000075 | Medium | High | 6.87 × 106 |
japonica | MAFF 301072 PT∗3 | 2 | Hordeum vulgare | AEAH 00000000 | Low | Medium | 1.35 × 106 |
aptata | DSM50252∗4 | 2 | Beta vulgaris | AEAN 00000000 | Low | Low | 1.19 × 106 |
aceris | MAFF 302273 PT∗5 | 2 | Acer sp. | AEAO 00000000 | Low | Low | 5.24 × 105 |
pisi | 1704B∗4 | 2 | Pisum sativum | AEAI 00000000 | Low | Low | 1.49 × 106 |
N/A | Cit7∗6 | 2 | Citrus leaf surface | AEAJ 00000000 | High | High | 1.32 × 107 |
N/A | TLP2 | 2 | Potato leaf surface | Gp0012374♢ | Medium | High | 1.45 × 106 |
phaseolicola‡ | 1448a∗7 | 3 | Phaseolus vulgaris | NC_005773 | Low | Medium | 1.42 × 106 |
actinidiae | MAFF 302091 PT∗8 | 1 | Actinidia deliciosa | AEAL 00000000 | Low | NA | NA |
maculicola¥ | ES4326∗9 | 5 | Raphanus sativus | AEAK 00000000 | Low | NA | NA |
oryzae | 1_6∗10 | 4 | Oryza sativa | ABZR 00000000 | Low | NA | NA |
Group designation and original plant source are given, with GenBank accession numbers for sequences used in phylogenetic tree construction (Borschinger et al., 2016).
∧Pathogenicity designations taken from significant log rank post hoc pairwise comparisons of survival data. In aphids, there is one overlap between the highest ‘Low’ strain and the lowest ‘Medium’ strain (pv. japonica and pv. aptata were not significantly different). In whiteflies, pv. syringae overlaps with pv. aceris and pv. phaseolicola.
‡Pathovar is renamed as Pseudomonas savastanoi, not P. syringae.
¥Strain is renamed as Pseudomonas cannabina pv. asilensis.
♢JGI project id, not GenBank accession.
∗References for strain isolation information where available.
1(Cuppels, 1986); 2(Loper and Lindow, 1987); 3(Mukoo, 1955); 4(Baltrus et al., 2011); 5(Sawada et al., 1999); 6(Hirano and Upper, 1990); 7(Teverson, 1991); 8(Takikawa and Inoue, 2003); 9(Davis et al., 1991); 10(Takeuchi and Munekata, 1992).