Table 1. Summary of sequencing data.
LF | LF-SO | |||
---|---|---|---|---|
LF1 | LF2 | LF-SO1 | LF-SO2 | |
Raw reads | 10,847,425 | 12,034,673 | 10,388,132 | 10,579,276 |
Clean reads1 | 9,951,849 | 11,245,052 | 9,810,954 | 8,140,532 |
% relative to raw data | 91.7% | 93.4% | 94.4% | 76.9% |
Sized reads2 | 9,877,580 | 11,149,432 | 9,729,540 | 8,043,022 |
% relative to raw data | 91.1% | 92.6% | 93.7% | 76% |
Mapped reads | 9,549,490 | 10,802,108 | 9,456,179 | 7,700,615 |
% relative to sized reads | 96.7% | 96.9% | 97.2% | 95.7% |
Unique sequence | 97,136 | 111,437 | 85,543 | 87,971 |
1Poly A stretches and adaptos removed
217-28nt size filtering