Table 9.

Selected Reports of Exon Rearrangements and Retroposition by Mobile DNA element Activity.

Rearrangements	Taxa
Group II intron retrotransposition and exon shuffling	Yeast
Chimeric LINE-mediated retrogene formation	Rice blast fungus Magnaporthe grisea
DNA “splicing” by transposase-related excision functions	Ciliated protists
Exon shuffling by DNA transposons (Pack-MULE, Ac/Ds, CACTA, Helitron)	Plants, including beans and maize
LINE-mediated duplications	Dicots
Retrotransposon-mediated exon shuffling	Maize, Medicago sativa
Exon shuffling by DNA transposons (Helitron, FB transposon)	Lepidoptera, Drosophila
Retrotransduction by LINEs and SINEs	Drosophila
Exon shuffling by retrotransposition	Mammals
Retrotransposon exon shuffling	Primates
TRIM5-Cyclophilin A (TRIMCyp) fusion by retrotransposition	Tree shrews and owl monkeys
Exon shuffling by retrotransposition	Humans
L1/LINE mediated retrotransduction	Humans
Alu or SVA SINE-mediated retrotransduction	Humans
Chimeric “retrogenes”, by LINE-mediated template switches at the RNA level	Humans

A more detailed and fully referenced version of this table is available as Supplementary Table S9.