| AAD | antibiotic associated diarrhoea |
| ABC | ATP-binding cassette |
| AGNB | anaerobic Gram-negative bacilli |
| AIDS | acquired immunodeficiency syndrome |
| AMX/CLA | amoxicillin-clavulanic acid |
| AMP/SUL | ampicillin-sulbactam |
| ASA | Anaerobe Society of the Americas |
| AST | antimicrobial susceptibility testing |
| ATP | adenosine-triphosphate |
| BBA | Brucella blood agar |
| BBE | Bacteroides bile esculin agar |
| BfPAI | Bacteroides fragilis pathogenicity island |
| BL-BLIC | beta-lactam-beta-lactamase inhibitor combination |
| BSAC | British Society for Antimicrobial Chemotherapy |
| BV | bacterial vaginosis |
| Caco-2 | Human epithelial colorectal adenocarcinoma |
| CCFA | Cefoxitin-cycloserine fructose agar |
| CNA | Colistin-nalidixic acid agar |
| CIDT | culture-independent diagnostic testing |
| CIP | ciprofloxacin |
| CLI | clindamycin |
| CLSI | Clinical and Laboratory Standards Institute |
| DIN | Deutsches Institut für Normung |
| DNA | deoxyribonucleic acid |
| EBV | Epstein-Barr virus |
| EDTA | ethylenediaminetetraacetic acid |
| EPI | efflux pump inhibitor |
| EMA | European Medicines Agency |
| ENRIA | European Network for Rapid Identification of Anaerobes |
| ESGAI | ESCMID Study Group for Anaerobic Infections |
| ETBF | enterotoxigenic Bacteroides fragilis |
| EUCAST | European Committe for Antimicrobial Susceptibility Testing |
| EYA | Egg-yolk agar |
| FDA | Food and Drug Administration of the United States |
| FX | cefoxitin |
| GLC | gas-liquid chromatography |
| IBS | irritable bowel syndrome |
| HCT-8 | human ileocecal carcinoma |
| HGT | horizontal gene transfer |
| HT-29 | human colon adenocarcinoma cell line |
| ID | identification |
| IS | insertion sequence |
| IMP | imipenem |
| KVLB | Kanamycin-vancomycin laked blood agar |
| LDH | lactate-dehydrogenase |
| MALDI-TOF MS | matrix-assisted laser desorption/ionization time-of-flight mass spectrometry |
| MATE | Multi-antimicrobial extrusion protein |
| MDCK | Madin Darby Canine Kidney cell line |
| MDR | multidrug resistant |
| MET | metronidazole |
| MIC | minimal inhibitory concentration |
| MLS | Macrolide-lincosamide-streptogramin B |
| MXF | moxifloxacin |
| NCLLS | National Committee for Clinical Laboratory Standards |
| PBP | penicillin-binding protein |
| PCR | polymerase chain reaction |
| PEA | Phenyletyl alcohol agar |
| PFOR | pyruvate:ferredoxin oxidoreductase |
| PID | pelvic inflammatory disease |
| PIP/TAZ | piperacillin-tazobactam |
| PRAS | pre-reduced anaerobically sterilised |
| QRDR | quionole resistance determining regions |
| RND | Resistance nodulation and division |
| rRNA | ribosomal ribonucleic acid |
| SCFA | short-chained fatty acid |
| SGE | spiral gradient endpoint |
| SOD | superoxide-dismutase |
| SCS | Schaedler blood agar |
| SPS | sodium polyanethol sulfonate |
| TET | tetracycline |
| WGS | whole-genome sequencing |