Table 4.
Overall performance of BNC constructed for each ORF-encoded protein.
| ORFs | HEV3 |
HEV4 |
||||
|---|---|---|---|---|---|---|
| Protein sitesa | F-measure Swine/Human | CAb (%) | Protein sitesa | F-measure Swine/Human | CAb (%) | |
| ORF1 | 514, 557, 643, 719, 720, 724, 728, 764, 775, 783, 795, 836, 855, 1005, 1234, 1449, 1506, 1507, 1599 and 1612 | 0.86/0.89 | 87.7 | 17, 462, 523, 531, 546, 560, 562, 574, 650, 683, 732, 733, 742, 756, 772, 779, 802, 804, 1096 and 1456 | 0.88/0.95 | 92.7 |
| ORF2 | 2, 12, 25, 30, 34, 48, 53, 67, 76, 103, 113, 149, 158, 188, 356, 473, 501, 511, 527, 529, 554, 571, 609, 649, 651 and 652 | 0.79/0.84 | 81.5 | 38, 39, 46, 78, 96, 98, 119, 146, 175, 318, 521, 527, 546, 609 and 614 | 0.73/0.88 | 83.6 |
| ORF3 | 3, 4, 7, 31, 33, 36, 38, 41, 56, 70, 76, 78, 81, 83, 85, 93, 94 and 99 | 0.59/0.81 | 73.8 | 2, 17, 29, 32, 42, 53, 67, 73, 79, 82, 84, 90 and 92 | 0.60/0.85 | 78.2 |
a
Numbering represent protein positions in respective ORFs.
b
Overall classification accuracy of classification by 10-fold CV.