Table 2.

Summary statistics of RNA-seq output

	Pre-filtered Reads	Filtered Reads	aMapping %
Leghorn	15,068,576	12,506,656	92.81
Fayoumi	13,022,086	10,816,065	92.49
Nonchallenged	14,490,133	12,050,144	92.71
Challenged	13,636,113	11,303,680	92.60
All	14,045,331	11,661,361	92.65

^aPercentage of filtered reads that mapped uniquely to the Gal5 reference genome