Table 2. Primary information for MTHFR polymorphisms (rs1801133 G>A, rs9651118 T>C rs4845882 G>A, rs4846048 A>G and rs3753584 T>C).
Genotyped SNPs | rs1801133 G>A | rs3753584 T>C | rs4845882 G>A | rs4846048 A>G | rs9651118 T>C |
---|---|---|---|---|---|
Chromosome | 1 | 1 | 1 | 1 | 1 |
Function | Missense | NearGene-5 | Intron | Intron | Intron |
Chr Pos (Genome Build 36.3) | 11778965 | 11787173 | 11765754 | 11768839 | 11784801 |
MAFa for Chinese in database | 0.439 | 0.093 | 0.198 | 0.105 | 0.382 |
MAF in our controls (n = 1,030) | 0.345 | 0.118 | 0.214 | 0.095 | 0.383 |
P value for HWEb test in our controls | 0.947 | 0.712 | 0.454 | 0.036 | 0.081 |
Genotyping method | SNPscan | SNPscan | SNPscan | SNPscan | SNPscan |
% Genotyping value | 99.87% | 99.94% | 99.94% | 99.94% | 99.94% |
aMAF: minor allele frequency;
bHWE: Hardy–Weinberg equilibrium