Table 1.
lncRNA databases.
| Name | Link | Dataset | Organism | PMID |
|---|---|---|---|---|
| ChIPBase v2.0 | http://rna.sysu.edu.cn/chipbase/ | transcriptional regulatory networks of ncRNAs and protein-coding genes | 10 species | 27924033 |
| DIANA-LncBase v2 | http://www.microrna.gr/LncBase/ | miRNA-lncRNA interactions | human and mouse | 26612864 |
| LNCipedia 4.1 | http://www.lncipedia.org/ | annotated lncRNA transcripts | human | 25378313 |
| lncRNAdb v2.0 | http://www.lncrnadb.org/ | functional lncRNAs | 68 species | 25332394 |
| LncRNADisease | http://www.cuilab.cn/lncrnadisease/ | lncRNA-disease associations | human | 23175614 |
| LncRNAWiki | http://lncrna.big.ac.cn/ | lncRNA knowledgebase | human | 25399417 |
| lncRNome | http://genome.igib.res.in/lncRNome/ | lncRNA knowledgebase | human | 23846593 |
| MONOCLdb | http://www.monocldb.org/ | lncRNAs expressed in collaborative cross founder mice in response to respiratory virus infection | mouse | 24922324 |
| NONCODE (v5.0) | http://www.noncode.org/ | lncRNA knowledgebase | 17 species | 26586799 |
| NRED | http://nred.matticklab.com/ | lncRNA expression | human and mouse | 18829717 |